Take a look at my old thread.
https://www.monetdb.org/pipermail/users-list/2015-July/008227.html
I seem to remember even if you disable rintegration on MonetDB is doesn't
take it into account
Take a look at the output of ldd /usr/lib64/monetdb5/lib_rapi.so or similar
path depending on your OS distro.
If you find a not found next to one of the lines like i did thats your
problem.
Also ldd your /usr/lib/libR.so and ldd all the .so file in the first output
this is how i remember fixing my problem but i can't remember exactly that
the issue was.
Once you find the not found i think a symlink fixes it.
Regards,
Brian Hood
On Sat, Apr 23, 2016 at 8:09 AM, Sjoerd Mullender
Did you clean out the destination directories, i.e. the directories where you installed everything? It sounds like there are still some old files there. In particular, monetdb5/autoload/50_rapi.mal and monetdb5/rapi.mal.
On 04/23/2016 05:54 AM, Anderson, David B wrote:
All,
I’ve built MonetDB from source using 11.21.19, but am having problems starting the Merovingian process. I am getting the following error even though I chose –disable-rintegration in the configure step. Does anyone know what I might have done incorrectly?
Thanks,
Dave
2016-04-22 23:36:11 MSG loan[7218]: # MonetDB 5 server v11.21.19 "Jul2015-SP4"
2016-04-22 23:36:11 MSG loan[7218]: # Serving database 'loan', using 24 threads
2016-04-22 23:36:11 MSG loan[7218]: # Compiled for x86_64-unknown-linux-gnu/64bit with 64bit OIDs and 128bit integers dynamically linked
2016-04-22 23:36:11 MSG loan[7218]: # Found 188.787 GiB available main-memory.
2016-04-22 23:36:11 MSG loan[7218]: # Copyright (c) 1993-July 2008 CWI.
2016-04-22 23:36:11 MSG loan[7218]: # Copyright (c) August 2008-2015 MonetDB B.V., all rights reserved
2016-04-22 23:36:11 MSG loan[7218]: # Visit http://www.monetdb.org/ for further information
2016-04-22 23:36:11 MSG loan[7218]: !TypeException:user.main[14]:object code for command rapi.prelude missing
2016-04-22 23:36:11 MSG loan[7218]: !TypeException:user.main[14]:'rapi.prelude' undefined in: rapi.prelude();
2016-04-22 23:36:11 MSG merovingian[6082]: database 'loan' (7218) has exited with exit status 0
2016-04-22 23:36:11 MSG merovingian[6082]: database 'loan' has shut down
2016-04-22 23:36:15 ERR merovingian[6082]: client error: database 'loan' started up, but failed to open up a communication channel
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